News
New review article published on Journal of Hepato-Biliary-Pancreatic Sciences
September 19, 2024)Our team just published a review on the available strategies to reconstruct the biliary tract in those clinical cases where standard nonanatomical bilioenteric reconstruction is not suitable. This review, authored by Dr. Jan Sevcik, thoroughly explores the history and current possibilities of anatomical biliary reconstruction in both clinical and experimental settings. For more details, the review is available at this link "Anatomical biliary reconstruction as an ultimum refugium for selective cases—History and current state of knowledge "
Two of our closest collaborators from Charles University received the Full Professorship
(June 25, 2024)On Thursday, June 13, 75 new professors received appointment decrees from the hands of Petr Pavel, President of the Czech Republic, and Mikuláš Bek, Minister of Education, Youth and Sports, of which 23 were from Charles University. Two of them are prof. MD Ondřej Fiala, Ph.D., who was appointed professor in the field of internal medicine and prof. RNDr. Pavel Souček, CSc., who was appointed professor of Biochemistry. In particular, Prof. Fiala is specialized in Oncology and works both at the Pilsen University Hospital and in our Faculty, while Prof. Souček works both at the Biomedical Center with us and at the Faculty of Sciences in Prague.
Our sincere congratulations go to both of them for this important achievement.
prof. MUDr. Ondřej Fiala, Ph.D., Professor of internal medicine
prof. RNDr. Pavel Souček, CSc., Professor of biochemistry
Our contribution to the 7th International Symposium Interface Biology of Implants (IBI) in Warnemünde, Germany
(June 20, 2024)From 5th to 7th June, 2024, two of our researchers attended the IBI symposium in Warnemünde were they presented our newest results from the in vivo implants of decellularized liver pieces in the porcine omentum (Dr. Moulisová) and from the orthotopic implantation of decellularized vena cava grafts (Ing. Massaro). The meeting, surrounded by the view of the Baltic Sea, provided the perfect place to exchange ideas on various aspect of in vivo research and in vitro methods to mimic the native environment.
Visit from high school students
(June 5, 2024)On June 4, a delegation of students from the Gymnázium a SOŠ Rokycany, an authorized school for the International Baccalaureate Diploma Programme, visited our Biomedical Center. Accompanied by their teachers, the students were informed about our research focused on surgery and on tissue engineering techniques. The students then took a tour of our laboratories of molecular biology, imaging and tissue engineering as well as our surgical theaters. We hoped they enjoyed their visit and that we sparked in them the passion for science that guides us every day in our research.
XLV Days of Medical Biophysics
(June 3, 2024)From May 26 to 28, the XLV meeting of the Czech-Slovak Society of Medical Biophysics (DLB) took place in Pilsen as annual gathering to share latest news on how Physics theory and practice is applied to Biomedicine. This year, the organizing committee was made from our collaborators from the Department of Biophysics of our Faculty. Members of our team attended the event in active or passive participation including Dr. Vladimira Moulisova (presentation on the in vivo implantation of decellularized liver scaffolds in the porcine omentum), Ing. Miroslav Jirik (on how software models and neural networks are applied in medicine), Ing. Maria Stefania Massaro (on the development of bioreactors for scaffolds repopulation) and Petr Hosek. Collateral activities included a visit to the DronySIT company premises in Pilsen for a show about their drone technology or the visit to the city's famous Pilsner Urquell Brewery. The meeting ended with the delegation from Olomouc (organizers of the next DLB) visiting the new building of our Faculty of Medicine.
Annual Meeting of Cancer Researchers in Javorná
(May 28, 2024)From May 17 to 19, an annual meeting of research teams from not only our medical faculty, but also our partners from the Institute of Experimental Medicine of the Czech Academy of Sciences and the National Institute of Public Health, took place in Javorná for the 13th time. The meeting was joined by our foreign scientists and students and a total of 35 researchers participated, presenting mostly results of their recent scientific activities. The event was also a working meeting of the investigators of the Chaperon Horizon 2020 project. The program was divided into two evenings packed with expert lectures, followed by discussion on the subject. Javorná meetings offer an excellent opportunity to discuss new ideas for further collaboration as well as technical and professional issues of current projects. As the nature near the Šumava National Park offers many hiking trails and views, most participants went for a short walk to Pancíř on Saturday morning despite the rainy and muddy conditions. The meeting was a very pleasant inspiration and motivation for further scientific activities and cooperation. On the way back to Pilsen, a few of our Team members stopped by the town of Přestice to pay homage at the black spotted pigs monument dedicated to the porcine breed we use in our research. More pictures taken during the meeting are available here.
61th Student Scientific Conference of Faculty of Medicine in Pilsen
(May 16, 2024)Several students from our Laboratory participated in the 61th Student Scientific Conference organized by our Faculty here in Pilsen. Both PhD and Master's student shared within the accademic community their research projects. From our Team, Dr. Sarcevic talked about the use of hydrogel sealants for early detection of anastomotic leakage after abdominal surgery, while Ing. Massaro explained her prototype bioreactor chamber derived from a Falcon tube for tissue engineering applications. As Master's students, Ilya Matsviayonak shared our new research on the comparison of the human and porcine liver scaffolds after decellularization and Marek Brousil showed the results of the histological analysis after implantation of decellularized porcine liver cubes in vivo in the pig omentum.
During the final Ceremony, Ing. Massaro was presented with the best presentation among the Doctoral Study program and including a financial reward of 13000 CZK. Congratulations to all the participants!
New publication in Discover Applied Sciences
(May 3, 2024)A group of researchers from our Laboratory just published their research on decellularized vena cava grafts orthotopically implanted in a pig model.
Within 28 days after implantation, the decellularized veins were fully recellularized with endothelial cells and smooth muscle cells. Quantitative histological analysis showed a comparable amount of smooth muscle actin in the repopulated decellularized grafts similar to the native IVC. Lymphocyte infiltrates representing signs of graft rejection were not detected in the pigs, as opposed to the control group that received the allogeneic grafts. The decellularized grafts provoked a higher incidence of thrombosis in comparison with allogeneic grafts (33.3 vs. 12.5%) but majority of the grafts remained patent.
Full link to the paper can be found here.
Chaperon Conference on Cancer Research
(April 26, 2024)We participated in the Closing Conference of the Chaperon project organized by the Laboratory of Translational Cancer Genomics. In the last 5 years, this project aimed at establishing a brand new Laboratory lead by prof. Kari Hemminki to study cancer genomics in a close collaboration with our own Laboratory and other partners. This conference was the proper celebration of the achievements of our partners in the EU funded project.
More on the Chaperon project can be found here http://chaperon.lfp.cuni.cz/
Ongoing collaboration with Faculty of Design and Art of West Bohemia University in Pilsen brought Virtual Reality in our Biomedical Center
(January 7, 2024)We are collaborating with the Ladislav Sutnar Faculty of Design and Art from University of West Bohemia on the design of a holder for our liver scaffold during the decellularization and in a recent meeting to share the progress, our partners showed us the overall concept of our prototype using virtual reality. It was a funny occasion to explore the world of virtual reality and its application in science and research.
PF 2024
(December 20, 2023)We wish you a joyful holiday season and the best of luck and happiness for 2024!
BIOCEV Regeneration III - Young Scientists Symposium
Our PhD student Maria Stefania Massaro gave a lecture about the possibility to use porcine decellularized blood vessels as suitable grafts for vascular surgery at the III Young Scientists Symposium of Tissue Engineering at the BIOCEV Research Center in Vestec (near Prague) as part of the V4RM network. The project aim was to characterize the decellularized vessels in terms of histological analysis as well as mechanical testing in collaboration with both the University of West Bohemia in Pilsen (New Technologies for the Information Society) and the Institute of Biomechanics at Graz Technical University (Austria). After the characterization of the scaffold, the project also focused on the repopulation with human endothelial cells in a bioreactor.
The topic of the talk generated plenty of questions from the audience as a core topic of tissue engineering itself.
IV Meeting of Centro 3R - the role of 3Rs in the age of One Health: where we are and where we are going (Milan, 13th-15th September) and European Society of Biomechanics Italian Chapter (Turin, 18th-19th September)
(September 28, 2023)Our PhD student Maria Stefania Massaro attended two different conferences organized in Italy earlier this month to present our research activity on bioreactors and mechanical characterization of blood vessels. In particular, the conference in Milan organized at University of Milano Bicocca focused on the goal of scientists to comply with the principles of reduction, refinement ad replacement in animal research. A great emphasis was given to organoids, organs-on-chip and in silico models to develop alternative methods not involving animals for drug testing and mimic the in vivo conditions. She presented a poster on our bioreactors for liver repopulation.
She also attended the Italian Chapter of the European Society of Biomechanics meeting organized at Politecnico di Torino were she had a talk on the mechanical properties of native and decellularized vessels. The meeting enlightened research about biomaterials mechanical characterization and in silico models. The event also included a social dinner at the oldest canoeing venue in Turin along the Po river (circolo Armida) inside the Valentino park.
Sutureless tissue connection using Intelligent Laser Tissue Soldering published in Small Methods
Our Laboratory, in cooperation with ETH Zürich, deals also with the development and application of new methods of sutureless tissue joining using laser soldering. The article Nanothermometry-Enabled Intelligent Laser Tissue Soldering by the author team Cipolato O, Dosnon L, Rosendorf J, Sarcevic S, Zäch M, Bondi A, Liska V, Schlegel AA, Herrmann IK was recently published in the journal Small Methods, Wiley (IF=12.4, Q1, D1). Laser tissue soldering is an innovative method that enables the connection of tissues and the closure of defects without the use of a classic surgical suture. After application, the collagen solder paste is activated by a laser to create a mechanically strong connection. The principle of the method was developed earlier, however, the impossibility of effectively preventing thermal tissue damage when using a laser hindered its application in practice. In the presented work, this problem is solved by a system of nano-thermometric dynamic regulation of radiation. The presented both In vitro and preliminary in vivo results on a non-surviving animal testify to the promise of the method, where thermal tissue damage was practically eliminated.
This alternative method to the classic suture is a way to close defects that are technically difficult to treat, especially due to access in the case of endoscopic and mini-invasive procedures, we assume implementation in endoscopic instrumentation. Preliminary results also show the extraordinary tightness and strength of those connections, which is an important aspect especially for mechanically stressed tissues and for the closure of luminal structures with the risk of developing a leak.
10th Summer School of Experimental Surgery
(July 17, 2023)As we've done in the last 10 years, from 3rd to 14th July we organized the Summer School of Experimental Surgery reaching the first milestone as 10th edition. The School main goal is to offer first hand training in surgical procedures to medical students as well as lectures from Internationally renowned professors and researchers on the techniques and latest findings in biomedicine. 32 students participated in the School from Czech Republic, Belgium, Italy, Poland, Turkey, Serbia and Spain. Half of the School time consisted in the training of surgical procedures (both in vivo and ex vivo) in a porcine model in our operating theaters. Lectures were given by our international collaborators: Prof. Dr-med. Pierre-Alain Clavien (University Hospital Zurich, What to know about Liver Surgery?), Dr. Monique M.A. Verstegen (Erasmus Medical Center Rotterdam, Design by Nature; Emerging Applications of Extracellular Matrix for Liver Regenerative Medicine), Prof. Dr. Inge Herrmann (ETH Zurich, Innovating medical materials and technology) and Dr. Alexandre H. C. Anthis (ETH Zurich, Robust and Intelligent Adhesives for the Abdominal Cavity). Other Lectures were given by collaborators from our Faculty departments and in particular by Prof. Dr. Kari Hemminki (Laboratory of Translational Cancer Genomics, Survival in Cancers), Prof. Dr. Jan Benes (Department of Anesthesiology and Resuscitation, Anesthesia in Animals Experiments), Prof. Ing Jaroslav Hrabak (Department of Microbiology, Microbiology in Surgical Practice) and Prof. Dr. Zbynek Tonar (Department of Histology and Embryology, Histological Methods in Experiment). Also members of our Laboratory gave lectures about Statistics (Ing. Petr Hosek), Tissue Engineering (Dr. Vladimira Moulisova) and Software Models (Ing. Miroslav Jirik). This year we also added practical lectures on the Basics of Vascular Anastomosis, Microsurgery and Plastic Surgery. We also had occasions to have fun during the School with Barbecue Parties and the visit to Pilsner Urquell Brewery followed by a LaserTag game.
We took the opportunity of the 10th edition to summarize the previous Summer Schools and create a Board of Members of our Team to acknowledge the yearly effort. We also take the opportunity to thank current and past members of the Team and the almost 300 students we trained in the past 10 years. More information can be found on the official website of the School, were also more pictures are available.
Second Multidisciplinary Conference of the Italian Researchers in the Czech Republic
(June 12, 2023)From 7th to 9th June Prof. Luca Vannucci, Head of the Laboratory of Immunoteraphy at the Institute of Microbiology of the Czech Accademy of Sciences and President of the Czech Immunological Society, coordinated and organized a meeting of the italian researchers active in the Czech Republic. Conference venue was the Italian Institute of Culture in Prague. The Italian Embassy, together with the Italian Institute of Culture, COMITES Czech Republic and Associazione Italiani nel Mondo, patronized the event. To be more inclusive and expand the participation to collaborators in the Laboratories where Italian researchers are working, the conference was held in English. Research among the Italians covers several fields such as biomedicine (from immunology to tissue engineering to veterinary sciences), physics (through the ELI Beamlines Facility) and literature often in high ranked positions in the Universities. Italian researchers are balanced between Prague and Brno. Our Ing. Maria Stefania Massaro was the only participant from Pilsen. She, together with the recemt;y graduated Dr. Jan Ševčík, presented their work on tissue engineering of liver, blood vessels and bile ducts with three (out of nine in total) posters.
Smart sealants for early detection of anastomotic leakage, article published in Advanced Science
(June 12, 2023)An article was published in Advanced Science (IF 17.521, Q1, Decile 1) this week that arises from the collaboration of our lab with the research team from ETH Zürich led by prof. Inge Herrmann. The paper titled Surgical Sealant with Integrated Shape-Morphing Dual Modality Ultrasound and Computed Tomography Sensors for Gastric Leak Detection authored by Suter B, Anthis AHC, Zehnder AK, Mergen V, Rosendorf J, Gerken LRH, Schlegel AA, Korcakova E, Liska V, Herrmann IK deals with one of our most important topics which is anastomotic leakage as a postoperative complication in the surgery of gastrointestinal tract. A stomach fluid sensitive patch was developed in this research in order to seal defects on stomach as a new form of treatment as well as to detect any insufficiency of the sealing method during the postoperative period on either ultrasonography or CT examinations using special echogenicity (or density) changing particles. The concept proved working well during an experiment on pig and is therefore a big step on a way to both prevention and early diagnostics of this complication, which means possible minimization of postoperative morbidity for many patients.
XLIV Days of Medical Biophysics in Stará Lesná, Slovakia
(June 12, 2023)From 31st May to 2nd June a delegation from our laboratory participated to the XLIV Days of Medical Biophysics conference organized by the Department of medical physics, biophysics, informatics and telemedicine of the Faculty of Medicine of Comenius University in Bratislava (Slovakia). The conference took place in the Tatra region of Slovakia, in the town of Stará Lesná. Our team contributed with presentations by Dr. Vladimíra Moulisová (decellularization and repopulation of liver scaffolds), Ing. Miroslav Jiřík (use of neural networks to determine the quality of our scaffolds based on histological sections) and Ing. Maria Stefania Massaro (on the decellularization, characterization and repopluation of blood vessels). The conference was rich of contributions from departments across both the Czech Republic and Slovakia. Ing. Massaro competed in the doctoral/young researchers section and was awarded the first place for best presentation. The conference ended with the official passage of the torch from the Slovakian organizers to our collaborator Dr. Lukáš Bolek who will organize the XLV edition here in Pilsen next year.
Latest findings from cancer research under a gothic roof: international conference brought researchers to the New Town Hall
(June 10, 2023)Top scientists discussed the latest findings in colon and pancreatic cancer research at the international conference "Current Understanding of Colorectal and Pancreatic Cancers (CUCAP)" on 29 and 30 May 2023. The successful event was organized by the Faculty of Medicine in Pilsen of the Charles University in cooperation with the Institute of Experimental Medicine of the Czech Academy of Sciences.
Important aspects of colon and pancreatic cancer research were presented through lectures by renowned speakers from many countries. The topics included epidemiology, genetics, epigenetics, microbiome and treatment of these serious diseases. The conference also provided a platform for young researchers to present their results in the form of posters and discuss their research.
Colorectal cancer is one of the critical problems in the West Bohemia region. This is one of the reasons why the research at the Biomedical Centre focuses on these types of cancer. The availability of a large pool of samples and patients with colorectal cancer in Pilsen is a great advantage for conducting studies in this area.
The main organizers of the conference were Professor Kari Hemminki, the central person of the ERA Chair "Chaperon" project at the Faculty of Medicine in Pilsen of the Charles University, and Dr. Pavel Vodička, head of the Department of Molecular Biology of Cancer at the Institute of Experimental Medicine CAS. Professor Hemminki is a recognized expert in the field of epidemiology and genetics of cancer. Prior to his appointment as the "ERA chair" at the Pilsen faculty, he led a research group at the German Cancer Research Center in Heidelberg. Now, thanks to the Chaperon project, he founded and leads the Laboratory of Translational Cancer Genomics at the Biomedical Centre of the Faculty of Medicine in Pilsen. Dr. Vodička is one of the researchers of the Chaperon project and a member of the Laboratory of Tumor Treatment and Tissue Regeneration at the Biomedical Center, and he also heads the Department of Molecular Biology of Cancer at the Institute of Experimental Medicine CAS. Dr. Vodička has been a recognized expert in the molecular epidemiology of cancer for many years, at both the national and international levels.
The conference was opened by the Rector of Charles University, Prof. Milena Králíčková, and during the opening ceremony she presented Dr. Pavel Vodička with a silver commemorative medal of the Charles University for his contribution to the development of medical sciences. Other guests who, together with the Rector, opened the conference, were the Dean of the Faculty of Medicine in Pilsen of the Charles University, Prof. Jindřich Fínek, and the Chairman of the Board of the Institute of Experimental Medicine of the CAS, Ing. Jan Topinka.
The conference was a unique gathering in the Czech Republic, which brought together the top personalities in the field – a total of almost a hundred participants from three continents. Among other participants, the conference was honored to host:
Ulrike Peters, from the Division of Epidemiology, Fred Hutchinson Cancer Research Center, USA, a leader in research on the molecular epidemiology and biology of colorectal cancer. She leads the international GECCO consortium, which brings together scientists from all over the world (USA, Canada, Europe, Asia, Australia).
Federico Canzian, from the Department of Genetics and Epidemiology at the German Cancer Research Center (DKFZ) in Heidelberg, is the long-standing leader of the European PANDORA consortium and, from 2022, the leader of the COST project bringing together scientists researching pancreatic cancer.
Sergi Castellví-Bel, Department of Gastroenterology, Hospital Clínic, University of Barcelona, Barcelona. Principal Investigator of two consecutive European COST projects looking in detail at the genetics of colorectal cancer.
Richarda de Voer, Department of Human Genetics, Radboud University Medical Centre, Nijmegen, The Netherlands, is a prominent figure in the molecular genetics of solid tumors.
Alessio Naccarati from the Italian Institute for Genomic Medicine (IIGM), Candiolo, Italy, who is also with the Institute of Experimental Medicine of the CAS. His main research topic is the application of liquid biopsy methods and epigenetics in further characterization of colorectal cancer.
Claire Palles, Department of Genetics and Genomics, Institute of Cancer and Genomic Sciences, College of Medical and Dental Science, University of Birmingham, UK. A leader in colorectal cancer research. Discovered a key polymerase enzyme proofreading in colorectal carcinogenesis.
Ondřej Slabý, Department of Cancer Biology and Genetics, Masaryk Cancer Institute, Czech Republic. A prominent, world-renowned protagonist of research on non-coding RNA molecules in carcinogenesis.
The conference was held under the auspices of the "ERA Chair" Chaperon project (ERA Chair Position for Excellent Research in Oncology), hosted by the Faculty of Medicine in Pilsen, Charles University. The main idea of the "ERA Chair" projects is to bring excellent scientists to developing universities and research institutions, thus injecting them with world-class know-how in research. These projects operate on two levels - the presence of a top researcher in the position of "ERA Chair" allows, on the one hand, to attract, retain and increase the quality of human resources and, on the other hand, to make the structural changes necessary to achieve excellence in the institution. The Faculty of Medicine in Pilsen of the Charles University was one of only four successful applicants in the Czech Republic for this grant in the Horizon 2020 call in 2019. In the follow-up Horizon Europe call, the Czech Republic was awarded five grants, so there are a total of 9 of these prestigious positions in the country.
During the Chaperon project, Professor Hemminki's research team has already published more than 80 research papers. Among the most important results, which also deal with malignancies other than the main focus of the conference, are two studies on hepatocellular carcinoma.
These studies have revealed important links between the course of the disease and the infiltration of immune cells into the tumor and its surroundings, along with genetic mutations in the tumor cells. These findings may contribute to the development of new approaches to the treatment of this type of cancer.
We would also like to thank Jitka Horáková, Petr Hošek, Barbora Černíková, Lenka Kuberková and Petra Havlíčková for the perfect preparation and organization of the congress.
Photos from CUCAP are available on the Chaperon project website.
60th Student Scientific Conference of Faculty of Medicine in Pilsen
(May 24, 2023)On May 17th, our Faculty organized again its annual Student Scientific Conference, which reached the 60th edition this year, for students enrolled both as undergraduate students of Medicine and Dentistry and as PhD students. Several students explained their contribution to the scientific fields they are involved in and and awards were given for best presentations in Czech and English. From our Laboratory, presentations in the postgraduate section were given by Ing. Maria Stefania Massaro on the study of blood vessels as potential cardiovascular grafts, MUDr Sima Šarčević on the application of nanomaterials patches to prevent intestinal anastomosis leaking and Roshan Kumar Singh on liver tissue engineering. Also our undergraduate students presented their activity: Jan Ševčík his project about bile ducts scaffolds for in vivo reconstruction, Lucie Kepková the veins scaffolds implanted in vivo, Táňa Drhovská the interactions between fibroblasts and nanomaterials loaded with antibiotics and Marek Brousil talked about histological processing of liver scaffolds implanted in vivo.
Our congratulations went to Jan Ševčík who received the award in honor of Prof. Treška on the best presentation in the surgical field.
More pictures are available here
Spring Meeting of Cancer Researchers in Javorná
(May 22, 2023)From May 12 to 14, 2023, a regular meeting of collaborating research teams from our medical faculty, as well as experts from the Institute of Experimental Medicine of the Czech Academy of Sciences, and from the National Institute of Public Health took place for the twelfth time. This year, Prof. Dr. Inge Herrmann from the Swiss ETH Zurich accepted our invitation as well. The meeting called “Contribution of Pharmacogenomics to the Diagnosis and Treatment of Generalized Colorectal Cancer” was joined by our foreign scientists and students and a total of 38 researchers participated in the event, presenting mostly the results of their recent scientific activities. The event was also a working meeting of the investigators of the project UNCE/MED/006: Centre for Clinical and Experimental Liver Surgery, as well as a laboratory meeting of the Chaperon Horizon 2020 project. The programme was divided into two evenings packed with expert lectures, followed by a discussion on the subject. There was also time for new ideas for further collaboration and discussions on technical and professional issues of current projects. As the nature near the Šumava National Park offers many hiking trails and views, most participants went for a short walk to Svinná on Saturday morning despite the unpleasant misty weather. The meeting was a very pleasant inspiration and motivation for further scientific activities and cooperation.
Intuitive Surgical Robotics course - training on the da Vinci Xi system
(April 20, 2023)From 27th March to 21st April we provided the facility for the Intuitive Surgical robotics course, where training on the da Vinci Xi system took place under the guidance of the trainer Jiří Cenk. A total of 20 doctors from the fields of surgery, gynecology, urology and oncology not only from the Czech Republic, but also from abroad (Slovakia, Romania, Poland, Switzerland and Finland) took part in the course. The education and training of surgeons and medical staff is very important for the provision of high-quality surgical care, which is why we are very pleased that this professional robotics training could take place in our Experimental Surgery premises.
IX Students’ Conference of Young Biomedical Researchers participation
(April 8, 2023)Our PhD Student, Roshan Kumar Singh took part in the International Student Conference of Young Biomedical Researchers (ISCYBR) held in Wroclaw, Poland from 30th March to 1st April 2023. The conference was lovely, welcoming and with fascinating conference topics. All the young scientists were brought together during the three-day conference and given a platform to discuss experiences in their fields of research. Conference included hot topics from Internal medicine, Oncology, Tissue engineering and controversies and trends in Medicine. Dr. Max Brzezicki (University of Oxford, United Kingdom), Prof. Miroslaw Banasik and Dr. Agnieszka Olejnik (both from Medical University of Wroclaw, Poland) gave lectures. The conference's impressive interdisciplinarity generated a lot of interest in the participating students and young scientists. Roshan Kumar Singh was awarded the prize for the best oral presentation given in English in the basic science session for his PhD work on "Characterization and quality assessment of decellularized liver scaffold structure".
Tissue Engineering and Regenerative Medicine International Society (TERMIS) European Chapter Meeting
(March 27, 2023)Our PhD student Maria Stefania Massaro, MEng. attended the Tissue Engineering and Regenerative Medicine International Society (TERMIS) European chapter in Manchester. The meeting is one of the most important related to Tissue Engineering with more than 1000 registered attendees mostly from Europe. Plenary lectures included internationally renowned researchers such as Matthew Dalby (UK), Jennifer H. Elisseeff (USA), Viola Vogel (Switzerland) and Cato T. Laurencin (USA). Topics of the conference included mechanobiology, bioreactor development, cartilage engineering, vascular engineering and surgical translation of regenerative medicine. She participated with a poster about the porcine caval vein decellularization and repopulation in vitro. During the 4 days of the meeting, there were plenty of opportunities to exchange ideas about research methods and relative results with the scientific community.
International Women and Girls in Science and International Women Day celebrations at Charles University
(March 8, 2023)On the 11th February, the International Day of Women and Girls in Science was celebrated. It is a date to promote the presence of girls and women in the STEM (Science, Tecnology, Engineering and Mathematics) field which is still considered to be more suitable for males rather than females. On this occasion, the University has decided to dedicate an article on Forum to International women that are doing research in one of the University Faculties and are facing not only the difficulties to do research, but also in what for them is a foreign country. It came with surprise and pleasure the decision to select as representative of the Faculty of Medicine in Pilsen one of our member, Maria Stefania Massaro, M.Eng, who joined us from Italy and is actively doing research in tissue engineering of different tissues. She is focused, in particular, on tissue decellularization and in the repopulation with static and dynamic techniques (with the use of in-house developed bioreactors). As part of the celebrations, she participated to a debate organized in Prague on 8th March where the documentary Picture a Scientist was projected and then discussed with the public and the rest of the invited researchers.
Research activity with our partners from ETH Zurich
(February 28, 2023)In February, we welcomed a delegation of friends from the Department of Mechanical and Process Engineering, ETH Zürich to test new patches for intestinal anastomosis healing in vivo. Plenty of data were collected during this two weeks visit in order to strengthen our research activity.
Multi-photon imaging of native and decellularized blood vessels
(January 17, 2023)In January,our PhD student Maria Stefania Massaro, M.Eng. went to Graz (Austria) to perform the multi-photon imaging of caval veins samples. This technique is based on the self excitation of collagen and elastin fibers at specific wavelenght and is a powerful tool to analyze and extract parameters to describe the fibers allignment such as the angle of orientation. This imaging was performed at the Institute of Molecular Biosciences at the University of Graz in collaboration with Dr. Heimo Wolinski (https://homepage.uni-graz.at/en/working-group-wolinski/).
PF 2023
(December 21, 2022)We wish you a joyful holiday season and the best of luck and happiness for 2023!
Applications for the Summer School of Experimental Surgery 2023 (along with the early bird discount) are still open at www.sses.eu.
Applied patches on a defect on the small intestine (left), ultrasound detection of the patches in vivo in active (middle) and non-active state (right)
Article by the Laboratory of Cancer Treatment and Tissue Regeneration published in Nature Communications
The team of the Cancer Treatment and Tissue Regeneration Laboratory together with the research team from ETH Zürich led by prof. Inge Hermann published the article Modular stimuli-responsive hydrogel sealants for early gastrointestinal leak detection and containment in the journal Nature Communications (IF 14.92, Q1). The project deals with the issue of anastomotic leak in digestive tract surgery and the development of an innovative patch for defects and anastomoses on the digestive tract. The task of the patch is both the prevention of the leak itself as well as its early diagnosis, which is ensured by its diagnostic components. If these components come into contact with the digestive tract, there is a change in the structure of these particles and thus a change in their echogenicity during sonography and a change in their density in a CT scan. This phenomenon enables early diagnosis of postoperative leak, which is essential for the prognosis of patients with this complication.
State award for Prof. Vladislav Třeška
(November 1, 2022)On the occasion of the national holiday, on October 28, 2022, the President of the Czech Republic, Miloš Zeman, awarded the First Class Merit Medal to Professor Vladislav Třeška, among others, for services to the state in the field of science and education. Representatives of Charles University are among the other new holders of the First Class Medal of Merit, the medal for heroism in memoriam awarded by the President to several students and student representatives of the Charles University executed on November 17, 1939.
Prof. MUDr. Vladislav Třeška, DrSc., is a graduate of the Faculty of Medicine in Pilsen, Charles University. As a native of Pilsen, he has remained loyal to his city to this day, even in the role of a renowned surgeon at the Department of Surgery in Pilsen University Hospital, where he has been the head for many years. Thanks to his professional work and successful medical practice, he became a world-renowned expert, especially in the field of transplantology, vascular and liver surgery. In these fields, he introduced a number of unique original methods that are applied in clinical practice. He was thus responsible for significant advances in medicine in the 21st century. Thanks to these key merits, he also became the head of the Transplantation Center in Pilsen. He participated in repeated internships at surgical clinics in Great Britain, the USA and Hong Kong.
Prof. Třeška works at the Medical Faculty of the Charles University in Pilsen as vice-dean for doctoral studies, habilitation and appointment procedures. For more than 30 years, he has been teaching to both Czech and foreign medical students, including post-graduate students – as a supervisor he led 10 doctoral students, all of whom defended their Ph.D.
His research and publication works (H index 23) are also significant, as well as his membership in many professional societies at the Czech and European level. He is the author or co-author of 19 monographs focusing on the above-mentioned professional topics. He is a frequently invited speaker and visiting professor in Europe, USA and Japan. He is the holder of many prizes and medals, especially for the creation of educational texts and important professional monographs.
One of our PhD student at the Institute of Biomechanics, Graz Technical University (Austria)
(October 17, 2022)Our PhD student, Ing. Massaro, just came back from an intenship in Graz, Austria, were she spent several weeks performing mechanical testing of some decellularized scaffolds for one of our projects. The internship is insidw the Institute of Biomechanics at Graz Technical University, led by Prof. Holzapfel (https://www.biomech.tugraz.at/). The intership was done as part of the START Project (START/MED/027) to characterize the decellularized caval veins with specific focus on the mechanical behaviour. The samples are mounted on the machine and then inflated at the physiologic pressure while they are immersed in a saline solution at 37°C to simulate the in vivo environment. Tests were done for native caval veins and for decellularized scaffolds to study the effects of cells removal on the tissue biomechanics.
Prof. Holzapfel Lab is focused on the application of Experimental and Computational Mechanics to soft tissues, with specific studies on the blood vessels, stomach tissue or brain both in health and disease conditions.
Our Lab at the IX Congress of Hepato-Pancreato-Biliary Surgery
(October 10, 2022)Last month, between 19-20th september, members of our Team participated to the IX Congress of Hepato-Pancreato-Biliary Surgery here in Plzen (HPB2022, https://www.chirurgieplzen2022.cz/) were we presented our research during several presentations. It was the meeting of the Czech Surgical Society and evidenced the importance of collaboration between the researchers at the University and the doctors at the hospitals in the development of new technologies for heathcare. Talks were given by Prof. Liška, Prof. Třeška, Dr. Moulisová, Dr. Brůha, Dr. Pálek, Dr. Rosendorf, Ing. Jiřík, Ing. Massaro, and by our main collaborators from the Laboratory of Translational Cancer Genomics (Prof. Hemminki, Dr. Ambrozkiewicz, Dr. Trailin), from the Department of Anaesthesiology and Resuscitation (Prof. Beneš), from the Department of Biophysics (Dr. Bolek) and from the Department of Imaging Methods (Prof. Mírka). Some collaborators and students attended the congress as passive participants (Dr. Lenka Červenková, Dr. Sima Šarčević, Jan Ševčík, Lucie Kepková, Táňa Drhovská).
Visit and seminar by Dr. David Hughes
(September 21, 2022)Working meeting of principal representatives of research groups, collaborating together in frame of international projects ERA Chair Chaperon and Inter-Cost, took place in Pilsen on September 12-15, 2022. On September 13, 2022, the Faculty of Medicine in Pilsen hosted a very interesting lecture entitled "Exploring two aspects of colorectal cancer development: genetically determined BMI at different lifestages and gut barrier dysfunction" which was delivered by the distinguished guest of the meeting, Dr. David Hughes. Dr. David Hughes is a fellow of the Conway Institute and co-director of the Cancer Biology & Therapeutics Laboratory, University College Dublin (UCD). He is a Governing Council Member of the Irish Cancer Epidemiology Network and the International Society for Selenium Research and a Working Group Member of the European Prospective Investigation into Cancer and Nutririon (EPIC) study. Dr. Hughes collaborates with the Faculty of Medicine in Pilsen thanks to EU funded Inter-COST program TRANSCOLONCAN, Action no.: CA17118.
The lecture was followed by a lively discussion on the given issue and new topics for further cooperation were discussed. As part of team building, a friendly meeting took place in a local restaurant, and the following day some of us took part in a trip to the nearby Bečov nad Teplou, Kladská and Mariánské Lázně.
The meeting was thus very beneficial in terms of current and future scientific cooperation and for strengthening working relationships.
One of our PhD students at the TERMIS EU Chapter 2022 in the beautiful Krakow (Poland)
(July 5, 2022)Last week the Tissue Engineering and Regenerative Medicine International Society (TERMIS) European Chapter 2022 (https://eu2022.termis.org/) took place at the ICE Congress Center in Krakow (Poland) from 28th June to 1st July and was attended by our PhD student Maria Stefania Massaro. She presented a poster about our decellularization technique for whole porcine liver and in-house developed bioreactors for small scaffold pieces repopulation with cells. The meeting was attended by around 800 researchers representing 40 countries and TERMIS is internationally recognized to be the most famous society about tissue engineering. The poster attracted the curiosity of other researcher and information about liver tissue engineering was shared. The podium presentations, that lasted for three and a half consecutive days with 5 parallel symposia each block, were about biofabrication and 3D printing, polymeric electrospinning, tissue decellularization, organoids and bioreactors to cyte some. A symposium on Tissue Engineering in the Czech Republic was the opportunity to met with other Czech Universities across our country, from Giancarlo Forte’s laboratory at St. Anne’s University Hospital and Josef Jaros (Masaryk University) in Brno, to Pavla Jendelova from the Czech Academy of Sciences in Prague and Miroslava Rysova from the Technical University in Liberec.
The organizing committee provided plenty of opportunity for networking both among young researchers, but also with the sponsoring companies and principal investigators or departments directors during the meeting.
A course on advanced surgery techniques tested our education skills
(June 29, 2022)Last week, we hosted a surgical course of the Johnson&Johnson Institute called Scenario Planning in Abdominal Surgery (photos on our facebook). The program's highlight was managing complications in laparoscopic abdominal surgery as well as a demonstration of stapling techniques – things that we don't do at the Summer School. Nevertheless, you need to walk before you can run, so that's why we are looking forward to teaching you the basics of surgery at the Summer School, starting next week!
Our team at the XLIII Days of Medical Biophysics congress in Bořetice (Moravia)
(June 15, 2022)Members of our team attended the XLIII DLB (Dný Lékařské Biofyziky) organized by the Czech-Slovak Society of Biophysics at Hotel Kravi Hora in Bořetice from 25th to 27th May. It was an opportunity to share our work related to tissue engineering and strenghten our collaboration with the Department of Biophysics of our Faculty.
More info, in Czech only, available here https://dlb2022.cz/
New courses for PhD students brought to life with Chaperon
(June 21, 2022)In collaboration with the Horizon 2020 Chaperon project, we are glad to announce that the first three courses of Chaperon's ERA Research Club for PhD students and young researchers are now permanently available in e-learning form on CUNI's Moodle platform.
The main aim of the ERA Research Club is to provide the necessary support for designing, conducting, analyzing and disseminating research work. Its curriculum is designed to utilize varying opportunities and media to enable the trainees to achieve their professional goals. The content of the courses is accessible after login and enrolment, but below is a short summary of the courses, which are:
PROPER course - Protocol, Reviewing, Ownership and Publishing in Experimental Research
Module 1A focuses on the different types of study design. Study design will determine several things including the study methodology, data analysis and requirements for study reporting. Module 1B presents a basic, yet comprehensive way of structuring study protocols to ensure they comply with international recommendations. Module 2 demonstrates a structured, objective and efficient strategy for peer review of studies. At the end of this module, students will be familiar with standardized reporting checklists that will enable them to critically appraise the literature based on study design. It will also give the basic building blocks of what is required when reporting one's own work. Module 3 tells Who is Who, the Can and Can’t do and what should be known before starting a research project. And, finally, module 4 will help the trainees write their research papers using a structured iterative process.
Project management
In its first module, the course focuses on the overall structure of the Horizon Europe program. The second, more practically oriented module provides details on the mobility-targeting Marie Sklodowska-Curie actions from the Horizon Europe portfolio. The final, third module presents the financial rules of Horizon Europe projects and demonstrates how to assemble and present their budget in the project proposal.
Basics of Graphics and Image Editing
This course gives an overview of two basic styles of electronic image representation, i.e. raster and vector graphics. It also explains how color works in computer graphics. Then, different aspects of photos (noisy images acquired from the physical world) and graphics (usually noisless images generated electronically) are explained. It then proceeds to the introduction to the concept of an image being represented by an array of numbers, which is then expanded by explaining what is going on when we adjust the brightness, contrast, levels or colors of the image, as well as providing basic information on the size and resolution of an image and how these can be changed. At the end, practical tips on working with images in MS Office programs and a demonstration of how to assemble a panel figure (A, B, C, D...) for a research paper are given. All topics are accompanied by numerous practical exercises.
Cancer research reigned over Javorná for the eleventh time
(May 25, 2022)From May 20th to 22nd, another instalment of the regular scientific meeting took place, bringing together collaborating research teams of not only the Faculty of Medicine in Pilsen but also experts from the Institute of Experimental Medicine of the Czech Academy of Sciences and from the National Institute of Public Health. The meeting called The Benefits of Pharmacogenomics for the Diagnostics and Treatment of Generalized Colorectal Carcinoma was held for the eleventh time close to the natural wonders of the Šumava National Park near the village of Čachrov. In total, 43 researchers participated, including also our new foreign colleagues and students this year. The agenda consisted mostly of presentations of recent research results of individual participants. The event was also a coordination meeting of the project UNCE/MED/006: Centrum of clinical and experimental liver surgery and a part of the series of Lab meetings of the Chaperon Horizon 2020 project. The program was divided into two evenings, both packed with research presentations followed by vivid discussion. There was also time for new research topic proposals and discussion of technical, organizational, and scientific issues of the ongoing projects. Also, Saturday morning was dedicated to a hike to the Pancíř mountain, which was endorsed by beautiful sunny weather. The meeting provided an extraordinary inspiration and motivation for further research and, last but not least, it helped to bring the collaborating teams closer again after the covid-induced isolation.
Ph. D. Positions Opening Now
at the Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Czech Republic
(February 16, 2022)Students for the following Ph.D. study topics are sought in the doctoral study programme:
DNA damage and its repair in mitochondrial DNA, implications in cancer cell*
Tutor: Pavel Vodička
Telomere homeostasis in interaction with DNA damage response in solid carcinogenesis*
Tutor: Pavel Vodička
Genomic/chromosomal instability in relation to microenvironment in colorectal cancer*
Tutor: Ludmila Vodičková
Tumor heterogeneity in colorectal carcinogenesis*
Tutor: Veronika Vymetálková
Modelling of vessel tree in porcine liver based on multi-domain CT scans*
Tutor: Miroslav Jiřík
MicroRNA profiling in hepatocellular carcinoma
Tutor: Filip Ambrozkiewicz
Differences in miRNA profile between colorectal cancer and colorectal cancer liver metastasis
Tutor: Filip Ambrozkiewicz
Immunohistochemical and transcriptional proling of dierent subregions in hepatocellular carcinoma
Tutor: Andriy Trailin
Immune cell landscape in primary and metastatic colorectal cancer
Tutor: Andriy Trailin
Genetic differences between primary and metastatic tumord from same patients
Tutor: Kari Hemminki
Application deadline: April 30, 2022
More about us: www.liskalab.eu, www.biomedic-plzen.cz, www.lfp.cuni.cz
Contact:
Barbora Stachová, barbora.stachova@lfp.cuni.cz
Tel: +420 377 593 467
Department of Science and Research
Charles University, Faculty of Medicine in Pilsen
*This topic could also be studied in Czech language